Carbon-13 and proton NMR assignments of a new agathisflavone derivative

The (1)H and (13)C NMR spectra of 5-acetyl-7,4'-dimethoxyflavone-(6-8')-5'-acetyl-7',4'-dimethoxyflavone, a new agathisflavone derivative, were completely assigned on the basis of 1D and 2D NMR techniques.     

Polysaccharide differences between planktonic and biofilm-associated EPS from Pseudomonas fluorescens B52

The polysaccharides associated with free (planktonic) and surface-attached (biofilm) cells from cultures of Pseudomonas fluorescens strain B52 were compared. Variations in the attached matrix due to surface material (glass or stainless steel) were also analyzed. Two digestion methods were used to optimize the recoveries of sugars, uronic acids and acidic substituents. The yield of analyzable material after digestion reached 90% for the material associated to the biofilms, though only 20–30% for that bound to planktonic cells. The polysaccharide(s) in the biofilm had glucuronic and guluronic acids as main components, besides rhamnose, glucose and glucosamine. The proportion of glucuronic to guluronic acid was higher in the polysaccharide(s) found in biofilms formed on stainless steel than in those on glass.     

Abel maps for curves of compact type

Recently, the first Abel map for a stable curve of genus g≥2 has been constructed. Fix an integer d≥1 and let C be a stable curve of compact type of genus g≥2. We construct two d-th Abel maps for C, having different targets, and we compare the fibers of the two maps. As an application, we get a characterization of hyperelliptic stable curves of compact type with two components via the second Abel map.     

Decay rates for the magneto-micropolar system in $$\varvec{L^2(}\pmb {\mathbb {R}}^{\varvec{n)}}$$

In this paper, the large time decay of the magneto-micropolar fluid equations on \(\mathbb {R}^n\) (\( n=2,3\)) is studied. We show, for Leray global solutions, that \( \Vert ({\varvec{u}},{\varvec{w}},{\varvec{b}})(\cdot ,t) \Vert _{{L^2(\mathbb {R}^n)}} \rightarrow 0 \) as \(t \rightarrow \infty \) with arbitrary initial data in \( L^2(\mathbb {R}^n)\). When the vortex viscosity is present, we obtain a (faster) decay for the micro-rotational field: \( \Vert {\varvec{w}}(\cdot ,t) \Vert _{{L^2(\mathbb {R}^n)}} = o(t^{-1/2})\). Some related results are also included.     

Two Semantical Approaches to Paraconsistent Modalities

In this paper we extend the anodic systems introduced in Bueno-Soler (J Appl Non Class Logics 19(3):291–310, 2009) by adding certain paraconsistent axioms based on the so called logics of formal inconsistency, introduced in Carnielli et al. (Handbook of philosophical logic, Springer, Amsterdam, 2007), and define the classes of systems that we call cathodic. These classes consist of modal paraconsistent systems, an approach which permits us to treat with certain kinds of conflicting situations. Our interest in this paper is to show that such systems can be semantically characterized in two different ways: by Kripke-style semantics and by modal possible-translations semantics. Such results are inspired in some universal constructions in logic, in the sense that cathodic systems can be seen as a kind of fusion (a particular case of fibring) between modal logics and non-modal logics, as discussed in Carnielli et al. (Analysis and synthesis of logics, Springer, Amsterdam, 2007). The outcome is inherently within the spirit of universal logic, as our systems semantically intermingles modal logics, paraconsistent logics and many-valued logics, defining new blends of logics whose relevance we intend to show.     

Evaluation of sample preparation methods for elastomer digestion for further halogens determination

In this work, three sample preparation methods were evaluated for further halogen determination in elastomers containing high concentrations of carbon black. Samples of nitrile-butadiene rubber, styrene-butadiene rubber, and ethylene-propylene-diene monomer elastomers were decomposed using oxygen flask combustion and microwave-induced combustion (MIC) for further Br and Cl determination by ion chromatography (IC), inductively coupled plasma optical emission spectrometry (ICP OES), and inductively coupled plasma mass spectrometry (ICP-MS). Extraction assisted by microwave radiation in closed vessels was also evaluated using water or alkaline solution. Digestion by MIC was carried out using 50 mmol l⁻¹ (NH₄)₂CO₃ as the absorbing solution. The effect of the reflux step was also evaluated. Accuracy was evaluated using certified reference materials with polymeric matrix composition and by comparison of results using neutron activation analysis. Agreement for Br and Cl was better than 95% by MIC using 5 min of reflux, and no statistical difference was found using IC, ICP OES, and ICP-MS for determination of both analytes. For MIC, the relative standard deviation (RSD) was lower than 5%. Using extraction in closed vessels, a high amount of residues was observed, and recoveries were lower than 45% for both analytes. For oxygen flask combustion, the agreement was similar using MIC but RSD was higher (20%). The residual carbon content, an important parameter used to evaluate the digestion efficiency, was always below 1% for MIC. Using MIC, it was possible to digest elastomers with high efficiency, resulting in a single solution suitable for halogen determination by different techniques.     

Molecular dynamics study of the active site of methylamine dehydrogenase

We have obtained AMBER94 force-field parameters for the TTQ cofactor of the enzyme methylamine dehydrogenase (MADH). This enzyme catalyzes the oxidation of methylamine to produce formaldehyde and ammonia. In the rate-determining step of the catalyzed reaction, a proton is transferred from the methyl group of the substrate to residue Asp76. We used the new parameters to perform molecular dynamics simulations of MADH in order to characterize the dynamics of the active site prior to the proton-transfer step. We found that only one of the oxygen atoms of Asp76 can act as an acceptor of the proton. The other oxygen interacts with Thr122 via a strong hydrogen bond. In contrast, because of the rotation the methyl group of the substrate, the three methyl hydrogen atoms are alternately in position to be transferred. The distance that the proton has to travel presents a broad distribution with a peak between 1.0 and 1.1 A and reaches values as short as 0.8 A. The fluctuation of the distance between the donor and the acceptor has the largest frequency component at 50 cm(-1), but the spectrum presents a rich structure between 10 and 400 cm(-1). The more important peaks appear below 250 cm(-1).     

Electroanalytical determination of eugenol in clove oil by voltammetry of immobilized microdroplets

Journal of Solid State Electrochemistry - The determination of eugenol employing voltammetry of immobilized microdroplets (VIM) is reported in this work. The construction of the electrode was based...     

An efficient methodology to study cyclodextrin clusters: application to α-CD hydrated monomer, dimer, trimer and tetramer

The hydrated α-cyclodextrin (α-CD) clusters resulting from the following process: nα-CD + n(H₂O)₆ → α-CD_n · 6nH₂O, with n = 1, 2, 3, 4, have been investigated using semiempirical (PM3), ab initio Hartree-Fock and Density Functional Theory (BLYP functional) levels of theory. The largest structure containing 576 atoms and 5,760 contracted basis functions (6-31G(d,p) basis set) poses as a considerable hard task for quantum chemical calculations. As the number of basis function increases rapidly with the cluster size, an alternative procedure to make the calculations feasible is certainly welcome, in order to perform BLYP calculations with an adequate basis set. Through the aid of a computer program that we developed, it became of practical use the selection of atom by atom basis sets, using the common chemical sense, enabling quantum mechanical calculations to be performed for very large molecular interacting systems (inclusion complexes), at an affordable computational cost. In this article we show how an appropriate selection of basis functions, leaving the CH_n groups with a minimal basis set and the oxygen atoms (and OH groups) with a better quality basis set, lower considerably the computational cost with no significant loss in the calculated interaction energies. A regular pattern is observed for α-CD hydrated monomer, dimer, trimer and tetramer, therefore adding support to the use of this procedure when studying larger hydrogen bonded clusters where electron correlation effects are important. We show that the procedure reported here enables DFT calculations for hydrated cyclodextrin using basis set up to the 6-311++G(3df,3pd) triple zeta quality .     

High purity anatase TiO(2) nanocrystals: near room-temperature synthesis, grain growth kinetics, and surface hydration chemistry

High purity, spherical anatase nanocrystals were prepared by a modified sol-gel method. Mixing of anhydrous TiCl(4) with ethanol at about 0 degrees C yielded a yellowish sol that was transformed into phase-pure anatase of 7.7 nm in size after baking at 87 degrees C for 3 days. This synthesis route eliminates the presence of fine seeds of the nanoscale brookite phase that frequently occurs in low-temperature formation reactions and also significantly retards the phase transformation to rutile at high temperatures. Heating the as-is 7.7 nm anatase for 2 h at temperatures up to 600 degrees C leads to an increase in grain size of the anatase nanoparticles to 32 nm. By varying the calcination time from 2 to 48 h at 300 degrees C, the particle size could be controlled between 12 and 15.3 nm. The grain growth kinetics of anatase nanoparticles was found to follow the equation, D(2) - D(0)(2) = k(0)t(m)e((-)(E)(a)/(RT)) with a time exponent m = 0.286(+/-9) and an activation energy of E(a) = 32 +/- 2 kJ x mol(-)(1). Thermogravimetric analysis in combination with infrared and X-ray photoemission spectroscopies has shown the anatase nanocrystals at different sizes to be composed of an interior anatase lattice with surfaces that are hydrogen-bonded to a wide set of energetically nonequivalent groups. With a decrease in particle size, the anatase lattice volume contracts, while the surface hydration increases. The removal of the surface hydration layers causes coarsening of the nanoparticles.